Example of a MIC Assay analysis:

Collecting the inputs:

The first step in the analysis of the MIC assay is to collect all variable inputs .. Link MIC_Input.xlsx template in the repo here

 1 import rda_toolbox as rda
 2
 3 rda.mic_process_inputs(
 4     # Input specifications excel:
 5     "../data/input/MIC_Input.xlsx",
 6     # Barcode reader file which shows Motherplate to AsT plate mapping
 7     "../data/input/DiS_MP_AsT_2024-10-08.txt",
 8     # Barcode reader file which shows Ast plate to AcD plate mapping
 9     "../data/input/AmA_AsT_AcD_20241009.txt",
10 ).save("../data/processed/prepared_input_mapping_table.csv", index=False)